If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ), 'gf_id' => 'HOM05D000550', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000550' ), 'data_identifier' => 'HOM05D000550', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000550', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '995', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p12350' => 'bna', 'A03p17260' => 'bna', 'A03p52590' => 'bna', 'A06p05130' => 'bna', 'A06p05150' => 'bna', 'A07p18750' => 'bna', 'A08p15340' => 'bna', 'A08p15380' => 'bna', 'A09p15890' => 'bna', 'A09p45810' => 'bna', 'A10p31960' => 'bna', 'Aa31LG10G7730' => 'aar', 'Aa31LG1G21160' => 'aar', 'Aa31LG1G4320' => 'aar', 'Aa31LG6G3050' => 'aar', 'Aa31sc125G20' => 'aar', 'Aa31sc269G40' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4293' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1160' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2600' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2602' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2606' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2607' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2609' => 'aag', 'Actinidia03718' => 'ach', 'Actinidia05424' => 'ach', 'Actinidia07926' => 'ach', 'Actinidia20442' => 'ach', 'Actinidia31318' => 'ach', 'Actinidia32481' => 'ach', 'Actinidia39199' => 'ach', 'Ah.08g211470' => 'amhyb', 'Ah.08g211480' => 'amhyb', 'Ah.12g057190' => 'amhyb', 'AL1G18420' => 'aly', 'AL1G18440' => 'aly', 'AL4G21910' => 'aly', 'AL6G13800' => 'aly', 'AL7G33150' => 'aly', 'AL7G33160' => 'aly', 'AL8G31980' => 'aly', 'Aqoxy1G01107' => 'aox', 'Aqoxy1G01198' => 'aox', 'Aqoxy1G01199' => 'aox', 'Aqoxy2G00242' => 'aox', 'Aqoxy2G00244' => 'aox', 'Aqoxy2G01159' => 'aox', 'Aqoxy2G01667' => 'aox', 'Aqoxy4G01270' => 'aox', 'Aqoxy4G02771' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1RT5A7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5W5TAL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7CM6K7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9733RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CII6MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G3AUWX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8M445' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N87U3K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q2F4V5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB69JS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X04733' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZEF0VH' => 'arhy', 'AT1G08065' => 'ath', 'AT1G08080' => 'ath', 'AT2G28210' => 'ath', 'AT3G52720' => 'ath', 'AT4G20990' => 'ath', 'AT4G21000' => 'ath', 'AT5G04180' => 'ath', 'ATR0193G005' => 'atr', 'ATR0193G012' => 'atr', 'ATR0193G015' => 'atr', 'ATR0193G016' => 'atr', 'ATR0193G033' => 'atr', 'ATR0193G044' => 'atr', 'ATR0437G001' => 'atr', 'ATR0495G020' => 'atr', 'ATR0721G073' => 'atr', 'ATR0776G003' => 'atr', 'ATR0893G002' => 'atr', 'ATR1062G001' => 'atr', 'ATR1157G001' => 'atr', 'ATR1157G002' => 'atr', 'Atru.chr1.1211' => 'acertr', 'Atru.chr1.1215' => 'acertr', 'Atru.chr1.1217' => 'acertr', 'Atru.chr3.3593' => 'acertr', 'Atru.chr3.3594' => 'acertr', 'Atru.chr3.3596' => 'acertr', 'Atru.chr8.1390' => 'acertr', 'Atru.chr8.1392' => 'acertr', 'Atru.chr8.1501' => 'acertr', 'Atru.chr8.1503' => 'acertr', 'Atru.chr8.1506' => 'acertr', 'Atru.chr8.1509' => 'acertr', 'Atru.chr8.1511' => 'acertr', 'Atru.chr8.1512' => 'acertr', 'Atru.chr8.1520' => 'acertr', 'Atru.chr8.1521' => 'acertr', 'Atru.chr8.1526' => 'acertr', 'Atru.chr8.1728' => 'acertr', 'Atru.chr8.1730' => 'acertr', 'Atru.chr8.1731' => 'acertr', 'Atru.chr8.1755' => 'acertr', 'Atru.chr8.1756' => 'acertr', 'Atru.chr8.1757' => 'acertr', 'Atru.chr8.1758' => 'acertr', 'AUR62006188' => 'cqu', 'AUR62006189' => 'cqu', 'AUR62026934' => 'cqu', 'AUR62026935' => 'cqu', 'AUR62026974' => 'cqu', 'AUR62028516' => 'cqu', 'AUR62028522' => 'cqu', 'AUR62041575' => 'cqu', 'AUR62043274' => 'cqu', 'AUR62044463' => 'cqu', 'BcaB01g00347' => 'bca', 'BcaB01g00348' => 'bca', 'BcaB01g03100' => 'bca', 'BcaB01g04072' => 'bca', 'BcaB02g06688' => 'bca', 'BcaB02g06690' => 'bca', 'BcaB02g07821' => 'bca', 'BcaB02g10156' => 'bca', 'BcaB03g11705' => 'bca', 'BcaB04g19927' => 'bca', 'BcaB05g22261' => 'bca', 'BcaB05g23772' => 'bca', 'BcaB07g31366' => 'bca', 'BcaC02g10955' => 'bca', 'BcaC03g12953' => 'bca', 'BcaC04g22455' => 'bca', 'BcaC05g24722' => 'bca', 'BcaC05g24724' => 'bca', 'BcaC05g24725' => 'bca', 'BcaC06g32121' => 'bca', 'BcaC07g39637' => 'bca', 'BcaC09g51282' => 'bca', 'BcaNung03111' => 'bca', 'BcaNung04158' => 'bca', 'BcaNung04714' => 'bca', 'BcaNung05417' => 'bca', 'BolC1t01434H' => 'bol', 'BolC3t14415H' => 'bol', 'BolC3t20643H' => 'bol', 'BolC4t23832H' => 'bol', 'BolC5t29369H' => 'bol', 'BolC5t29371H' => 'bol', 'BolC7t45603H' => 'bol', 'BolC8t50412H' => 'bol', 'BolC9t54820H' => 'bol', 'BolC9t60007H' => 'bol', 'BraA01t01180Z' => 'bra', 'BraA03t11000Z' => 'bra', 'BraA03t14333Z' => 'bra', 'BraA06t23720Z' => 'bra', 'BraA06t23722Z' => 'bra', 'BraA07t29584Z' => 'bra', 'BraA08t33515Z' => 'bra', 'BraA09t37225Z' => 'bra', 'BraA09t40042Z' => 'bra', 'BraA10t45240Z' => 'bra', 'C01p14850' => 'bna', 'C03p20370' => 'bna', 'C03p83650' => 'bna', 'C04p23300' => 'bna', 'C05p06100' => 'bna', 'C05p06120' => 'bna', 'C07p51030' => 'bna', 'C08p28000' => 'bna', 'C09p19130' => 'bna', 'C09p72670' => 'bna', 'CAN.G2150.1' => 'can', 'CAN.G2150.2' => 'can', 'CAN.G397.54' => 'can', 'CAN.G488.28' => 'can', 'CAN.G631.45' => 'can', 'CAN.G641.29' => 'can', 'CANSAT54G0796' => 'cansat', 'CANSAT64G2356' => 'cansat', 'CANSAT80G0385' => 'cansat', 'CANSAT80G0409' => 'cansat', 'CANSAT80G0777' => 'cansat', 'CANSAT80G0961' => 'cansat', 'CANSAT80G2095' => 'cansat', 'CARHR007870' => 'chi', 'CARHR007880' => 'chi', 'CARHR007900' => 'chi', 'CARHR107500' => 'chi', 'CARHR121100' => 'chi', 'CARHR162590' => 'chi', 'CARHR209080' => 'chi', 'CARHR221080' => 'chi', 'CARHR227540' => 'chi', 'CARHR227550' => 'chi', 'CARHR269770' => 'chi', 'Carub.0001s0743' => 'cru', 'Carub.0002s1157' => 'cru', 'Carub.0004s0903' => 'cru', 'Carub.0004s0907' => 'cru', 'Carub.0005s0841' => 'cru', 'Carub.0005s1917' => 'cru', 'Carub.0006s0313' => 'cru', 'Carub.0007s2044' => 'cru', 'Carub.0007s2045' => 'cru', 'Carub.0008s1668' => 'cru', 'Ca_03915_v3' => 'car', 'Ca_19292_v3' => 'car', 'Ca_19293_v3' => 'car', 'Ca_22960_v3' => 'car', 'Ca_26405_v3' => 'car', 'CBR_g12070' => 'cbr', 'CBR_g12072' => 'cbr', 'CBR_g3213' => 'cbr', 'CBR_g3215' => 'cbr', 'CBR_g3220' => 'cbr', 'CBR_g3223' => 'cbr', 'CBR_g3232' => 'cbr', 'CBR_g34505' => 'cbr', 'CBR_g54091' => 'cbr', 'Cc01_g10860' => 'ccan', 'Cc06_g04490' => 'ccan', 'Cc06_g05880' => 'ccan', 'Cc06_g18140' => 'ccan', 'Cc06_g18150' => 'ccan', 'Cc07_g19850' => 'ccan', 'CDE02G0616' => 'cde', 'CDE02G3613' => 'cde', 'CDE03G0358' => 'cde', 'CDE04G0821' => 'cde', 'CDE04G1553' => 'cde', 'CDE04G1803' => 'cde', 'CDE07G0482' => 'cde', 'CDE07G0953' => 'cde', 'CDE07G1213' => 'cde', 'CDE09G1178' => 'cde', 'CDE09G1343' => 'cde', 'Cfa011324' => 'cfa', 'Cfa011325' => 'cfa', 'Cfa016614' => 'cfa', 'Cfa016773' => 'cfa', 'Cfa016774' => 'cfa', 'Cfa016776' => 'cfa', 'Cfa017647' => 'cfa', 'Cfa017648' => 'cfa', 'Ciclev10003227m.g' => 'ccl', 'Ciclev10005610m.g' => 'ccl', 'Ciclev10013720m.g' => 'ccl', 'Ciclev10029790m.g' => 'ccl', 'Ciclev10030314m.g' => 'ccl', 'CiPaw.03G187200' => 'cil', 'CiPaw.06G063100' => 'cil', 'CiPaw.09G014700' => 'cil', 'CiPaw.09G040600' => 'cil', 'CiPaw.10G010200' => 'cil', 'CiPaw.10G035700' => 'cil', 'CiPaw.10G128000' => 'cil', 'CiPaw.10G128100' => 'cil', 'CiPaw.10G130900' => 'cil', 'CiPaw.13G116300' => 'cil', 'CiPaw.13G116400' => 'cil', 'CiPaw.13G116500' => 'cil', 'CiPaw.13G116600' => 'cil', 'CiPaw.13G116800' => 'cil', 'CiPaw.13G123500' => 'cil', 'ClCG03G002920' => 'cla', 'ClCG03G002940' => 'cla', 'ClCG03G002960' => 'cla', 'ClCG03G002970' => 'cla', 'ClCG03G008360' => 'cla', 'ClCG04G003730' => 'cla', 'ClCG04G009410' => 'cla', 'ClCG10G018930' => 'cla', 'ClCG10G019920' => 'cla', 'ClCG10G019930' => 'cla', 'ClCG10G019940' => 'cla', 'COL.COLO4_18302' => 'col', 'COL.COLO4_26917' => 'col', 'COL.COLO4_29724' => 'col', 'COL.COLO4_36508' => 'col', 'COL.COLO4_36510' => 'col', 'Cpa.g.sc182.21' => 'cpa', 'Cpa.g.sc182.22' => 'cpa', 'Cpa.g.sc182.23' => 'cpa', 'Cpa.g.sc311.11' => 'cpa', 'Cpa.g.sc311.9' => 'cpa', 'Cpa.g.sc5.13' => 'cpa', 'Cpa.g.sc92.97' => 'cpa', 'Cre04.g223050' => 'cre', 'Cre04.g223100' => 'cre', 'Cre09.g415700' => 'cre', 'CsaV3_1G013850' => 'csa', 'CsaV3_1G013860' => 'csa', 'CsaV3_1G013870' => 'csa', 'CsaV3_1G013890' => 'csa', 'CsaV3_1G013910' => 'csa', 'CsaV3_3G036150' => 'csa', 'CsaV3_3G036160' => 'csa', 'CsaV3_3G036170' => 'csa', 'CsaV3_3G036180' => 'csa', 'CsaV3_3G037320' => 'csa', 'CsaV3_4G027720' => 'csa', 'CsaV3_6G039990' => 'csa', 'CSS0000866' => 'camsi', 'CSS0004857' => 'camsi', 'CSS0006023' => 'camsi', 'CSS0008799' => 'camsi', 'CSS0014094' => 'camsi', 'CSS0016535' => 'camsi', 'CSS0016580' => 'camsi', 'CSS0016971' => 'camsi', 'CSS0019488' => 'camsi', 'CSS0020847' => 'camsi', 'CSS0022041' => 'camsi', 'CSS0023581' => 'camsi', 'CSS0035550' => 'camsi', 'CSS0040156' => 'camsi', 'CSS0042097' => 'camsi', 'CSS0044077' => 'camsi', 'CSS0048640' => 'camsi', 'DCAR_007756' => 'dca', 'DCAR_009114' => 'dca', 'DCAR_009116' => 'dca', 'DCAR_009119' => 'dca', 'DCAR_009309' => 'dca', 'DCAR_013393' => 'dca', 'DCAR_020806' => 'dca', 'DCAR_020807' => 'dca', 'Dinv31690' => 'din', 'Dinv31691' => 'din', 'Dinv32713' => 'din', 'Dinv32714' => 'din', 'Dinv32716' => 'din', 'Dinv35810' => 'din', 'Dinv37333' => 'din', 'Dinv39663' => 'din', 'Duzib093G1212' => 'dzi', 'Duzib093G1778' => 'dzi', 'Duzib093G2024' => 'dzi', 'Duzib093G2106' => 'dzi', 'Duzib106G0180' => 'dzi', 'Duzib106G1117' => 'dzi', 'Duzib106G1892' => 'dzi', 'Duzib106G1945' => 'dzi', 'Duzib128G0252' => 'dzi', 'Duzib128G0965' => 'dzi', 'Duzib128G1468' => 'dzi', 'Duzib150G0056' => 'dzi', 'Duzib168G0213' => 'dzi', 'ECA236G0375' => 'eca', 'ECA248G1323' => 'eca', 'ECA248G2278' => 'eca', 'ECA248G3952' => 'eca', 'EL10Ac7g16672' => 'bvu', 'EL10Ac7g16674' => 'bvu', 'EL10Ac7g16675' => 'bvu', 'EL10Ac7g16676' => 'bvu', 'EL10Ac7g16678' => 'bvu', 'EL10Ac7g16910' => 'bvu', 'EL10Ac7g16912' => 'bvu', 'Eucgr.A01625' => 'egr', 'Eucgr.A01626' => 'egr', 'Eucgr.A01627' => 'egr', 'Eucgr.A01630' => 'egr', 'Eucgr.A01632' => 'egr', 'Eucgr.A01633' => 'egr', 'Eucgr.A01636' => 'egr', 'Eucgr.A01640' => 'egr', 'Eucgr.A01642' => 'egr', 'Eucgr.B02520' => 'egr', 'Eucgr.B02522' => 'egr', 'Eucgr.K01571' => 'egr', 'Eucgr.K02021' => 'egr', 'Eucgr.K02031' => 'egr', 'FAN02G0512' => 'fan', 'FAN02G1529' => 'fan', 'FAN02G3114' => 'fan', 'FAN05G1265' => 'fan', 'FAN05G1595' => 'fan', 'FAN05G1612' => 'fan', 'FAN05G2193' => 'fan', 'FAN05G2762' => 'fan', 'FAN05G3072' => 'fan', 'FAN05G3339' => 'fan', 'FAN05G3774' => 'fan', 'FAN05G4239' => 'fan', 'FAN05G5011' => 'fan', 'FAN05G5349' => 'fan', 'FAN05G5372' => 'fan', 'FAN09G0362' => 'fan', 'FAN09G0707' => 'fan', 'FAN09G0757' => 'fan', 'FAN09G1695' => 'fan', 'FAN09G3511' => 'fan', 'FAN09G3868' => 'fan', 'FAN14G1609' => 'fan', 'FAN14G3959' => 'fan', 'FAN14G4657' => 'fan', 'FAN14G4667' => 'fan', 'FAN14G4708' => 'fan', 'FAN16G3220' => 'fan', 'FAN18G1154' => 'fan', 'FAN21G0946' => 'fan', 'FvH4_3g31680' => 'fve', 'FvH4_5g02430' => 'fve', 'FvH4_6g16680' => 'fve', 'FvH4_6g16682' => 'fve', 'FvH4_6g16690' => 'fve', 'FvH4_6g16730' => 'fve', 'FvH4_6g16740' => 'fve', 'FvH4_6g16840' => 'fve', 'FvH4_6g16850' => 'fve', 'FvH4_6g18830' => 'fve', 'FvH4_6g24590' => 'fve', 'Glyma.03G133600' => 'gma', 'Glyma.03G185500' => 'gma', 'Glyma.03G185600' => 'gma', 'Glyma.10G059200' => 'gma', 'Glyma.10G059400' => 'gma', 'Glyma.10G073400' => 'gma', 'Glyma.11G196600' => 'gma', 'Glyma.11G196700' => 'gma', 'Glyma.12G175800' => 'gma', 'Glyma.12G176000' => 'gma', 'Glyma.13G146100' => 'gma', 'Glyma.13G324400' => 'gma', 'Glyma.19G135900' => 'gma', 'Glyma.19G137100' => 'gma', 'Glyma.19G185900' => 'gma', 'Gohir.A01G212500' => 'ghi', 'Gohir.A01G212600' => 'ghi', 'Gohir.A01G212700' => 'ghi', 'Gohir.A04G070700' => 'ghi', 'Gohir.A05G105200' => 'ghi', 'Gohir.A05G105300' => 'ghi', 'Gohir.A09G120700' => 'ghi', 'Gohir.A09G120775' => 'ghi', 'Gohir.A13G231000' => 'ghi', 'Gohir.D01G201300' => 'ghi', 'Gohir.D01G201400' => 'ghi', 'Gohir.D04G099200' => 'ghi', 'Gohir.D04G099300' => 'ghi', 'Gohir.D04G109400' => 'ghi', 'Gohir.D05G105000' => 'ghi', 'Gohir.D05G105050' => 'ghi', 'Gohir.D08G035250' => 'ghi', 'Gohir.D09G116800' => 'ghi', 'Gohir.D09G116900' => 'ghi', 'Gohir.D13G236600' => 'ghi', 'Gorai.002G246000' => 'gra', 'Gorai.002G246100' => 'gra', 'Gorai.006G135100' => 'gra', 'Gorai.006G135300' => 'gra', 'Gorai.009G109000' => 'gra', 'Gorai.009G109100' => 'gra', 'Gorai.009G401600' => 'gra', 'Gorai.009G402000' => 'gra', 'Gorai.009G413500' => 'gra', 'Gorai.013G267400' => 'gra', 'GSVIVG01005048001' => 'vvi', 'GSVIVG01005049001' => 'vvi', 'GSVIVG01025217001' => 'vvi', 'GSVIVG01033673001' => 'vvi', 'GSVIVG01033852001' => 'vvi', 'HanXRQChr01g0001011' => 'han', 'HanXRQChr01g0019191' => 'han', 'HanXRQChr01g0019201' => 'han', 'HanXRQChr01g0019211' => 'han', 'HanXRQChr01g0019231' => 'han', 'HanXRQChr01g0019241' => 'han', 'HanXRQChr04g0125021' => 'han', 'HanXRQChr04g0125031' => 'han', 'HanXRQChr04g0125041' => 'han', 'HanXRQChr05g0133651' => 'han', 'HanXRQChr06g0176751' => 'han', 'HanXRQChr11g0346231' => 'han', 'HanXRQChr11g0350541' => 'han', 'HanXRQChr11g0350551' => 'han', 'HanXRQChr11g0350581' => 'han', 'HanXRQChr11g0350731' => 'han', 'HanXRQChr11g0350751' => 'han', 'HanXRQChr11g0350761' => 'han', 'Haze_19618' => 'cav', 'Haze_19784' => 'cav', 'Haze_19785' => 'cav', 'Haze_19786' => 'cav', 'Haze_20503' => 'cav', 'Haze_20506' => 'cav', 'Haze_23851' => 'cav', 'Haze_23852' => 'cav', 'Haze_23853' => 'cav', 'Haze_23855' => 'cav', 'Haze_23856' => 'cav', 'Hma1.2p1_0297F.1_g117160' => 'hma', 'Hma1.2p1_0307F.1_g119960' => 'hma', 'Hma1.2p1_0307F.1_g119980' => 'hma', 'Hma1.2p1_0412F.1_g147320' => 'hma', 'Hma1.2p1_0820F.1_g223860' => 'hma', 'HPP92_003761' => 'vpl', 'HPP92_006205' => 'vpl', 'HPP92_006350' => 'vpl', 'HPP92_009045' => 'vpl', 'HPP92_009954' => 'vpl', 'HPP92_012782' => 'vpl', 'Hund03246' => 'sun', 'Hund03247' => 'sun', 'Hund03248' => 'sun', 'Hund19927' => 'sun', 'Lalb_Chr01g0017261' => 'lal', 'Lalb_Chr06g0171871' => 'lal', 'Lalb_Chr20g0110461' => 'lal', 'Lalb_Chr22g0359571' => 'lal', 'Lj1A1125T59' => 'lonja', 'Lj1A199G27' => 'lonja', 'Lj1A199T26' => 'lonja', 'Lj1A199T27' => 'lonja', 'Lj1A200T27' => 'lonja', 'Lj1A200T28' => 'lonja', 'Lj1A200T29' => 'lonja', 'Lj1C1125T5' => 'lonja', 'Lj1g0012376' => 'lja', 'Lj2A118T30' => 'lonja', 'Lj3C990T4' => 'lonja', 'Lj3g0013795' => 'lja', 'Lj3g0025990' => 'lja', 'Lj3P990T28' => 'lonja', 'Lj5g0006142' => 'lja', 'Lj5g0008874' => 'lja', 'Lj5g0018613' => 'lja', 'Lj5g0027396' => 'lja', 'Lsat_1_v5_gn_1_51381' => 'lsa', 'Lsat_1_v5_gn_1_51401' => 'lsa', 'Lsat_1_v5_gn_1_51421' => 'lsa', 'Lsat_1_v5_gn_1_63840' => 'lsa', 'Lsat_1_v5_gn_1_63880' => 'lsa', 'Lsat_1_v5_gn_1_63920' => 'lsa', 'Lsat_1_v5_gn_8_77340' => 'lsa', 'Lsat_1_v5_gn_8_82241' => 'lsa', 'Manes.04G017900' => 'mes', 'Manes.08G012600' => 'mes', 'Manes.09G010200' => 'mes', 'Manes.09G017600' => 'mes', 'Manes.09G017700' => 'mes', 'Manes.09G054900' => 'mes', 'Manes.09G063042' => 'mes', 'Manes.09G063048' => 'mes', 'Manes.11G147601' => 'mes', 'Manes.11G147700' => 'mes', 'Manes.11G147850' => 'mes', 'Manes.11G147900' => 'mes', 'Mapoly0008s0080' => 'mpo', 'Mapoly0008s0097' => 'mpo', 'Mapoly0008s0109' => 'mpo', 'Mapoly0009s0057' => 'mpo', 'Mapoly0012s0062' => 'mpo', 'Mapoly0012s0063' => 'mpo', 'Mapoly0012s0065' => 'mpo', 'Mapoly0012s0067' => 'mpo', 'Mapoly0012s0068' => 'mpo', 'Mapoly0012s0070' => 'mpo', 'Mapoly0012s0071' => 'mpo', 'Mapoly0035s0110' => 'mpo', 'Mapoly0041s0087' => 'mpo', 'Mapoly0047s0102' => 'mpo', 'Mapoly0060s0019' => 'mpo', 'Mapoly0063s0074' => 'mpo', 'Mapoly0064s0075' => 'mpo', 'Mapoly0079s0066' => 'mpo', 'Mapoly0109s0051' => 'mpo', 'Mapoly0204s0001' => 'mpo', 'Mapoly0204s0002' => 'mpo', 'Mapoly0204s0003' => 'mpo', 'Mapoly0359s0002' => 'mpo', 'Mapoly0932s0001' => 'mpo', 'MBI03_g05989_MAGBIO' => 'mbi', 'MBI03_g05990_MAGBIO' => 'mbi', 'MBI03_g05991_MAGBIO' => 'mbi', 'MBI03_g33014_MAGBIO' => 'mbi', 'MBI03_g33015_MAGBIO' => 'mbi', 'MBI15_g33562_MAGBIO' => 'mbi', 'MBI17_g07076_MAGBIO' => 'mbi', 'MBI17_g08338_MAGBIO' => 'mbi', 'MBI17_g12075_MAGBIO' => 'mbi', 'MBI17_g34581_MAGBIO' => 'mbi', 'MBI17_g36835_MAGBIO' => 'mbi', 'MBI17_g36838_MAGBIO' => 'mbi', 'MCO11G919' => 'mco', 'MD00G1067900' => 'mdo', 'MD03G1121900' => 'mdo', 'MD03G1165000' => 'mdo', 'MD04G1089400' => 'mdo', 'MD04G1089500' => 'mdo', 'MD11G1140500' => 'mdo', 'MD12G1024600' => 'mdo', 'MD12G1083000' => 'mdo', 'MD12G1107800' => 'mdo', 'MD12G1108000' => 'mdo', 'MD12G1108100' => 'mdo', 'MD12G1108200' => 'mdo', 'MD14G1078100' => 'mdo', 'Medtr0219s0070' => 'mtr', 'Medtr0219s0130' => 'mtr', 'Medtr1g059900' => 'mtr', 'Medtr1g059940' => 'mtr', 'Medtr1g059960' => 'mtr', 'Medtr1g062860' => 'mtr', 'Medtr1g062880' => 'mtr', 'Medtr7g090950' => 'mtr', 'Medtr7g102960' => 'mtr', 'MELO3C004915.2' => 'cme', 'MELO3C004922.2' => 'cme', 'MELO3C004925.2' => 'cme', 'MELO3C009476.2' => 'cme', 'MELO3C024476.2' => 'cme', 'MELO3C026330.2' => 'cme', 'MELO3C031011.2' => 'cme', 'MELO3C031012.2' => 'cme', 'MELO3C031013.2' => 'cme', 'MELO3C031015.2' => 'cme', 'MELO3C035349.2' => 'cme', 'MELO3C035509.2' => 'cme', 'Migut.D02246' => 'egut', 'Migut.J00449' => 'egut', 'Migut.J01029' => 'egut', 'Migut.J01717' => 'egut', 'Migut.J01718' => 'egut', 'Migut.J01719' => 'egut', 'Migut.J01720' => 'egut', 'Migut.K00103' => 'egut', 'Migut.L01718' => 'egut', 'Migut.L01784' => 'egut', 'MSTRG.10369' => 'ama', 'MSTRG.10808' => 'ama', 'MSTRG.17785' => 'ama', 'MSTRG.19265' => 'ama', 'MSTRG.19836' => 'ama', 'MSTRG.26134' => 'ama', 'MSTRG.26679' => 'ama', 'MSTRG.26680' => 'ama', 'Nitab4.5_0000063g0210' => 'nta', 'Nitab4.5_0000082g0310' => 'nta', 'Nitab4.5_0000106g0260' => 'nta', 'Nitab4.5_0000106g0290' => 'nta', 'Nitab4.5_0000106g0300' => 'nta', 'Nitab4.5_0000132g0500' => 'nta', 'Nitab4.5_0000692g0010' => 'nta', 'Nitab4.5_0002626g0020' => 'nta', 'Nitab4.5_0004083g0010' => 'nta', 'Nitab4.5_0004117g0070' => 'nta', 'Nitab4.5_0005283g0040' => 'nta', 'Nitab4.5_0006698g0030' => 'nta', 'Nitab4.5_0010656g0020' => 'nta', 'Nn2g13731' => 'nnu', 'Nn2g13783' => 'nnu', 'Nn2g13839' => 'nnu', 'Nn2g14168' => 'nnu', 'Nn2g15113' => 'nnu', 'Nn5g28159' => 'nnu', 'Nn5g28172' => 'nnu', 'Nn6g34888' => 'nnu', 'Nn6g35227' => 'nnu', 'Nn6g35228' => 'nnu', 'Nn7g36419' => 'nnu', 'Oeu001287.1' => 'oeu', 'Oeu002972.1' => 'oeu', 'Oeu002975.1' => 'oeu', 'Oeu002979.1' => 'oeu', 'Oeu005044.1' => 'oeu', 'Oeu041481.1' => 'oeu', 'Oeu041482.1' => 'oeu', 'Oeu047863.1' => 'oeu', 'Os02g0533300' => 'osa', 'Os04g0412500' => 'osa', 'Os06g0610100' => 'osa', 'Os08g0423500' => 'osa', 'Os08g0423600' => 'osa', 'Os08g0424100' => 'osa', 'Os08g0470200' => 'osa', 'Os08g0470700' => 'osa', 'Os09g0454500' => 'osa', 'Os11g0153200' => 'osa', 'Os12g0153500' => 'osa', 'Peaxi162Scf00002g00349' => 'pax', 'Peaxi162Scf00110g00123' => 'pax', 'Peaxi162Scf00404g00066' => 'pax', 'Peaxi162Scf00492g00010' => 'pax', 'Peaxi162Scf00948g00223' => 'pax', 'Peaxi162Scf00948g00225' => 'pax', 'PGR004G2727' => 'pgr', 'PGR102G0939' => 'pgr', 'PGR142G1831' => 'pgr', 'PGR142G3089' => 'pgr', 'PGR142G3470' => 'pgr', 'PGR142G3868' => 'pgr', 'PGSC0003DMG400008094' => 'stu', 'PGSC0003DMG400008170' => 'stu', 'PGSC0003DMG400008954' => 'stu', 'PGSC0003DMG400024315' => 'stu', 'PGSC0003DMG400037605' => 'stu', 'Phvul.001G129100' => 'pvu', 'Phvul.001G180900' => 'pvu', 'Phvul.005G133000' => 'pvu', 'Phvul.005G133400' => 'pvu', 'Phvul.007G151300' => 'pvu', 'Phvul.007G151500' => 'pvu', 'Phvul.007G152600' => 'pvu', 'Phvul.011G081900' => 'pvu', 'Potri.004G212800' => 'ptr', 'Potri.006G047400' => 'ptr', 'Potri.006G047500' => 'ptr', 'Potri.006G121900' => 'ptr', 'Potri.006G212900' => 'ptr', 'Potri.009G010200' => 'ptr', 'Potri.016G043700' => 'ptr', 'Potri.016G079600' => 'ptr', 'Pp3c18_6840' => 'ppa', 'Pp3c20_17520' => 'ppa', 'Pp3c26_6810' => 'ppa', 'Pp3c26_6890' => 'ppa', 'Pp3c26_6930' => 'ppa', 'Pp3c26_6961' => 'ppa', 'Pp3c26_6990' => 'ppa', 'Pp3c3_25570' => 'ppa', 'Pp3c7_9400' => 'ppa', 'Pp3c7_9420' => 'ppa', 'Pp3c7_9490' => 'ppa', 'Pp3c7_9500' => 'ppa', 'Pp3c7_9520' => 'ppa', 'Pp3c7_9540' => 'ppa', 'Pp3c7_9610' => 'ppa', 'Pp3c7_9630' => 'ppa', 'Pp3s775_10' => 'ppa', 'Pp3s775_50' => 'ppa', 'Prupe.4G263400' => 'ppe', 'Prupe.4G263500' => 'ppe', 'Prupe.4G264600' => 'ppe', 'Prupe.6G104900' => 'ppe', 'Prupe.7G052800' => 'ppe', 'Prupe.7G109300' => 'ppe', 'Prupe.7G126200' => 'ppe', 'Prupe.7G126300' => 'ppe', 'Prupe.7G126400' => 'ppe', 'Prupe.7G126500' => 'ppe', 'Prupe.7G126600' => 'ppe', 'Psat0s10721g0040' => 'psa', 'Psat0s453g0040' => 'psa', 'Psat0s7035g0040' => 'psa', 'Psat0s744g0080' => 'psa', 'Psat0ss3805g0040' => 'psa', 'Psat3g039840' => 'psa', 'Psat3g074640' => 'psa', 'Psat6g072440' => 'psa', 'Psat6g075120' => 'psa', 'Psat6g075160' => 'psa', 'Psat6g075320' => 'psa', 'Psat6g075480' => 'psa', 'Psat6g081400' => 'psa', 'PSO063G0526' => 'pso', 'PSO063G3351' => 'pso', 'PSO135G0965' => 'pso', 'PSO339G0992' => 'pso', 'PSO339G1212' => 'pso', 'PSO339G2707' => 'pso', 'PSO339G6199' => 'pso', 'PSO339G6491' => 'pso', 'PSO384G0253' => 'pso', 'PSO384G1547' => 'pso', 'PSO384G1675' => 'pso', 'PSO724G0547' => 'pso', 'QL01p021266' => 'qlo', 'QL01p021403' => 'qlo', 'QL01p021431' => 'qlo', 'QL07p003782' => 'qlo', 'QL07p003840' => 'qlo', 'QL07p003857' => 'qlo', 'QL07p003866' => 'qlo', 'QL07p003875' => 'qlo', 'QL07p003907' => 'qlo', 'QL07p003920' => 'qlo', 'QL07p003957' => 'qlo', 'QL07p038936' => 'qlo', 'QL07p042420' => 'qlo', 'QL07p042434' => 'qlo', 'QL07p042444' => 'qlo', 'QL07p042467' => 'qlo', 'QL07p042630' => 'qlo', 'QL07p042676' => 'qlo', 'QL11p043243' => 'qlo', 'RcHm_v2.0_Chr1g0339681' => 'rch', 'RcHm_v2.0_Chr3g0470641' => 'rch', 'RcHm_v2.0_Chr3g0470661' => 'rch', 'RcHm_v2.0_Chr3g0470681' => 'rch', 'RcHm_v2.0_Chr3g0470851' => 'rch', 'RcHm_v2.0_Chr3g0470871' => 'rch', 'RcHm_v2.0_Chr3g0473841' => 'rch', 'RcHm_v2.0_Chr3g0483901' => 'rch', 'RcHm_v2.0_Chr5g0050381' => 'rch', 'RcHm_v2.0_Chr5g0056011' => 'rch', 'RcHm_v2.0_Chr5g0058391' => 'rch', 'Rhsim01G0215100' => 'rsi', 'Rhsim03G0029100' => 'rsi', 'Rhsim03G0029200' => 'rsi', 'Rhsim03G0029300' => 'rsi', 'Rhsim03G0029400' => 'rsi', 'Rhsim03G0029500' => 'rsi', 'Rhsim03G0031200' => 'rsi', 'Rhsim03G0074700' => 'rsi', 'Rhsim04G0140600' => 'rsi', 'Rhsim04G0140800' => 'rsi', 'Rhsim04G0141200' => 'rsi', 'Rhsim09G0014200' => 'rsi', 'Sabra04G0143800' => 'sbr', 'Sabra06G0096100' => 'sbr', 'Sabra06G0163900' => 'sbr', 'Sabra09G0006200' => 'sbr', 'Sabra16G0048500' => 'sbr', 'Sabra16G0085500' => 'sbr', 'Sabra16G0087600' => 'sbr', 'SalBow1G0749' => 'sbo', 'SalBow1G3120' => 'sbo', 'SalBow3G1321' => 'sbo', 'SalBow3G1578' => 'sbo', 'SalBow3G3105' => 'sbo', 'SalBow5G0473' => 'sbo', 'SalBow5G1248' => 'sbo', 'SalBow5G4796' => 'sbo', 'SalBow6G0040' => 'sbo', 'SalBow6G0498' => 'sbo', 'Sc02g0001510' => 'sci', 'Sc07g0005620' => 'sci', 'Sed0000517' => 'sed', 'Sed0005041' => 'sed', 'Sed0006930' => 'sed', 'Sed0008407' => 'sed', 'Sed0010685' => 'sed', 'Sed0017334' => 'sed', 'Sed0019523' => 'sed', 'Sed0021013' => 'sed', 'Sed0023761' => 'sed', 'Sed0023801' => 'sed', 'Sed0024017' => 'sed', 'Sed0024305' => 'sed', 'Sed0027478' => 'sed', 'SEGI_03771' => 'sgi', 'SEGI_04820' => 'sgi', 'SEGI_05103' => 'sgi', 'SEGI_11056' => 'sgi', 'SEGI_12355' => 'sgi', 'SEGI_17282' => 'sgi', 'SEGI_18160' => 'sgi', 'SEGI_23873' => 'sgi', 'SEGI_23879' => 'sgi', 'SEGI_25984' => 'sgi', 'SEGI_29158' => 'sgi', 'SEGI_30960' => 'sgi', 'SEGI_31399' => 'sgi', 'SEGI_31818' => 'sgi', 'SEGI_33836' => 'sgi', 'SEGI_33918' => 'sgi', 'SEGI_34807' => 'sgi', 'SEGI_35045' => 'sgi', 'SEGI_39615' => 'sgi', 'SGA_v2.0_scaffold105G30371' => 'sas', 'SGA_v2.0_scaffold116G32245' => 'sas', 'SGA_v2.0_scaffold13G06710' => 'sas', 'SGA_v2.0_scaffold180G39636' => 'sas', 'SGA_v2.0_scaffold184G39966' => 'sas', 'SGA_v2.0_scaffold40G15476' => 'sas', 'SGA_v2.0_scaffold69G23125' => 'sas', 'SGA_v2.0_scaffold75G24828' => 'sas', 'SGA_v2.0_scaffold94G28497' => 'sas', 'SHI07925' => 'shi', 'SMO111G0063' => 'smo', 'SMO112G0009' => 'smo', 'SMO115G0075' => 'smo', 'SMO166G0015' => 'smo', 'SMO172G0060' => 'smo', 'SMO172G0069' => 'smo', 'SMO172G0125' => 'smo', 'SMO174G0092' => 'smo', 'SMO198G0002' => 'smo', 'SMO198G0017' => 'smo', 'SMO198G0025' => 'smo', 'SMO198G0067' => 'smo', 'SMO198G0074' => 'smo', 'SMO238G0003' => 'smo', 'SMO244G0052' => 'smo', 'SMO244G0062' => 'smo', 'SMO244G0081' => 'smo', 'SMO281G0010' => 'smo', 'SMO329G0077' => 'smo', 'SMO351G0303' => 'smo', 'SMO361G0313' => 'smo', 'SMO364G0862' => 'smo', 'Solyc06g075050.2' => 'sly', 'Solyc06g075060.2' => 'sly', 'Solyc06g075070.4' => 'sly', 'Solyc09g008420.3' => 'sly', 'Solyc09g009830.3' => 'sly', 'Solyc10g079270.3' => 'sly', 'Solyc10g083890.2' => 'sly', 'Solyc11g069640.2' => 'sly', 'Sopen06g031480' => 'spe', 'Sopen06g031490' => 'spe', 'Sopen09g003250' => 'spe', 'Sopen09g004590' => 'spe', 'Sopen10g029920' => 'spe', 'Sopen10g033340' => 'spe', 'Sopen11g028350' => 'spe', 'Sp1g06720' => 'spa', 'Sp1g06740' => 'spa', 'Sp4g11020' => 'spa', 'Sp5g09620' => 'spa', 'Sp6g38570' => 'spa', 'TAR369G0150' => 'tar', 'TAR369G0170' => 'tar', 'TAR623G1643' => 'tar', 'TAR628G0917' => 'tar', 'TAR633G0024' => 'tar', 'TAR633G0196' => 'tar', 'TAR633G0954' => 'tar', 'TAR633G1050' => 'tar', 'TAR633G1160' => 'tar', 'TAR633G1248' => 'tar', 'TAR633G1920' => 'tar', 'TAR633G2743' => 'tar', 'THA.LOC104799761' => 'tha', 'THA.LOC104800592' => 'tha', 'THA.LOC104804905' => 'tha', 'THA.LOC104807067' => 'tha', 'THA.LOC104824867' => 'tha', 'THA.LOC104827407' => 'tha', 'Thecc.05G071000' => 'tca', 'Thecc.05G090000' => 'tca', 'Thecc.05G146800' => 'tca', 'Thecc.05G147100' => 'tca', 'Thecc.05G147500' => 'tca', 'Thecc.09G344300' => 'tca', 'Thecc.09G344600' => 'tca', 'Thhalv10008451m.g' => 'esa', 'Thhalv10009315m.g' => 'esa', 'Thhalv10010611m.g' => 'esa', 'Thhalv10014359m.g' => 'esa', 'Thhalv10014397m.g' => 'esa', 'Thhalv10017075m.g' => 'esa', 'Thhalv10023909m.g' => 'esa', 'Thhalv10027157m.g' => 'esa', 'TPR.G18238' => 'tpr', 'TPR.G21007' => 'tpr', 'TPR.G21021' => 'tpr', 'TPR.G3234' => 'tpr', 'TPR.G32798' => 'tpr', 'TPR.G32833' => 'tpr', 'TPR.G40759' => 'tpr', 'TPR.G6136' => 'tpr', 'TPR.G7316' => 'tpr', 'TPR.G9889' => 'tpr', 'TWI31G0526' => 'twi', 'TWI53G1793' => 'twi', 'TWI74G0047' => 'twi', 'TWI74G0080' => 'twi', 'TWI74G0640' => 'twi', 'TWI74G0864' => 'twi', 'TWI77G0215' => 'twi', 'TWI79G0558' => 'twi', 'TWI79G0867' => 'twi', 'unitig_26.g9057' => 'ugi', 'unitig_578.g16363' => 'ugi', 'unitig_749.g14148' => 'ugi', 'unitig_899.g14924' => 'ugi', 'vmacro00657' => 'vma', 'vmacro07411' => 'vma', 'vmacro08788' => 'vma', 'vmacro14418' => 'vma', 'vmacro14419' => 'vma', 'vmacro21965' => 'vma', 'VMungo0720G0006' => 'vmu', 'VMungo0720G0304' => 'vmu', 'VMungo0720G0387' => 'vmu', 'VMungo1080G0329' => 'vmu', 'VMungo1080G0821' => 'vmu', 'VMungo1080G0840' => 'vmu', 'VMungo1127G1091' => 'vmu', 'VMungo1383G1204' => 'vmu', 'VMungo1383G1791' => 'vmu', 'VMungo1383G2785' => 'vmu', 'Zm00001eb037940' => 'zma', 'Zm00001eb037950' => 'zma', 'Zm00001eb083840' => 'zma', 'Zm00001eb092650' => 'zma', 'Zm00001eb100420' => 'zma', 'Zm00001eb176620' => 'zma', 'Zm00001eb197090' => 'zma', 'Zm00001eb388490' => 'zma' ) $gf_id = 'HOM05D000550' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000550' ) $data_identifier = 'HOM05D000550' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 7, 'amhyb' => (int) 3, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 12, 'ath' => (int) 7, 'atr' => (int) 14, 'acertr' => (int) 24, 'cqu' => (int) 10, 'bca' => (int) 26, 'bol' => (int) 10, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 11, 'cru' => (int) 10, 'car' => (int) 5, 'cbr' => (int) 9, 'ccan' => (int) 6, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 5, 'cil' => (int) 15, 'cla' => (int) 11, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 3, 'csa' => (int) 12, 'camsi' => (int) 17, 'dca' => (int) 8, 'din' => (int) 8, 'dzi' => (int) 13, 'eca' => (int) 4, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 29, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 10, 'vvi' => (int) 5, 'han' => (int) 18, 'cav' => (int) 11, 'hma' => (int) 5, 'vpl' => (int) 6, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 11, 'lja' => (int) 7, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 24, 'mbi' => (int) 12, 'mco' => (int) 1, 'mdo' => (int) 13, 'mtr' => (int) 9, 'cme' => (int) 12, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 13, 'nnu' => (int) 11, 'oeu' => (int) 8, 'osa' => (int) 11, 'pax' => (int) 6, 'pgr' => (int) 6, 'stu' => (int) 5, 'pvu' => (int) 8, 'ptr' => (int) 8, 'ppa' => (int) 18, 'ppe' => (int) 11, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 19, 'rch' => (int) 11, 'rsi' => (int) 12, 'sbr' => (int) 7, 'sbo' => (int) 10, 'sci' => (int) 2, 'sed' => (int) 13, 'sgi' => (int) 19, 'sas' => (int) 9, 'shi' => (int) 1, 'smo' => (int) 22, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 5, 'tar' => (int) 12, 'tha' => (int) 6, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 10, 'twi' => (int) 9, 'ugi' => (int) 4, 'vma' => (int) 6, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb388490' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1